stGrads Tutorial Documentation

Contents:

• Installation
  • Requirements
  • Install the development version
  • (Optional) Install common dependencies for the tutorials
  • Install from a local clone (advanced)
• 10x Visium Tutorial (PDAC demo)
  • Prepare a lightweight Visium object
  • Run the stGrads Visium Demo (Step1–Step4)
  • Tips & Notes
  • Advanced function
  • Session info
• 10x Visium HD Tutorial (internal datasets)
  • Prepare environment & load the HD object
  • Run the stGrads Visium HD Demo (Step1–Step4)
  • Notes
  • Session info